Funded Publications

Publications out of this project:

Eric Anslyn (PI) - University of Texas
Daniel Malamud (PI) - University of Pennsylvania
Anup Singh (PI) - Sandia National Laboratories
Paul Yager (PI) - University of Washington Bioengineering
David Stahl (PI)- UW Civil & Enviromental Engineering
David Walt (PI) - Tufts University
David Wong (PI) - UCLA

Related Publications

Eric Anslyn (PI) - University of Texas

Publications coming soon!

Daniel Malamud (PI) - University of Pennsylvania

Shizhi Qian, Raimund Bürger, and Haim H Bau. Analysis of Sedimentation Biodetectors. Chemical Engineering Science (In Press, 2004).

Yolanda Ann Slaughter and Daniel Malamud. Oral diagnostics for the geriatric populations: Current status and future prospects. Dental Clinics of North America.
(In Press, 2004)

Carol Holm-Hansen, Gary Tong, Cheryl Davis, William R. Abrams, and Daniel Malamud. Comparison of Oral Fluid Collectors for Use in a Ra[pid Point-of-Care Diagnostic Device. Clinical and Diagnostic Laboratory Immunology 11:909-912 (2004).

D. Malamud, H. Bau, S. Niedbala, and P. Corstjens. Point Detection of Pathogens in Oral Samples Adv. in Dental Res. (In Press, 2004).

Corstjens, PLAM, Li, S, Zuiderwijk, M, Kardos, K, Abrams, WR, Niedbala, RS, and Tanke, HJ. Infrared up-converting phosphors for bioassays. Submitted: Special issue IEE Proceedings Nanobiotechnology (2004): Nanoparticles for Biotechnology Applications. (In Press, 2004)

Zongyuan Chen, Shizhi Qian, William R. Abrams, Daniel Malamud, and Haim H. Bau. Thermosyphon-Based PCR Reactor: Experiment and Modeling. Anal. Chem. 76:3707-3715 (2004).

Shizhi Qian and Haim H. Bau. Analysis of Lateral Flow Bio-detectors: Competitive Format. Analytical Biochemistry 326: 211-224, 2004.

Michel Zuiderwijk, Hans J. Tanke, R. Sam Niedbala, Paul L. A. M. Corstjens. An amplification-free hybridization-based DNA assay to detect Streptococcus pneumoniae utilizing the up-converting phosphor technology. Clin. Biochem., Vol 36:401-403 (2003).

Shizhi Qian and Haim H. Bau. A mathematical model of lateral flow bioreactions applied to sandwich assays. Analytical Biochemistry 322: 89-98, 2003.

Paul LAM Corstjens, Michel Zuiderwijk, Mats Nilsson, Hans Feindt, R. Sam Niedbala, and Hans J. Tanke. Lateral-flow and up-converting phosphor reporters to detect single-stranded nucleic acids in a sandwich-hybridization assay. Anal. Biochem. 312:191-200 (2003).

XY Chen, HZ Xhuang, S Li, R S Niedbala, and GK Liu. Confinement on the energy transfer between luminescent centers in nanocrystals. J Applied Physics 94:5559-5565 (2003).

Corstjens, PLAM, Li, S, Zuiderwijk, M, Kardos, K, Abrams, WR, Niedbala, RS, and Tanke, HJ. Infrared up-converting phosphors for bioassays. IEE Proc.-Nanobiotechnol., Vol. 152:64-72 (2005).

Yolanda Ann Slaughter and Daniel Malamud. Oral diagnostics for the geriatric populations: Current status and future prospects. Dent. Clin. North Am. 49:445-461 (2005).

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Anup Singh (PI) - Sandia National Laboratories

On-chip native gel electrophoresis-based immunoassays for tetanus antibody and toxin, Herr, AE; Throckmorton, DJ; Davenport, AA; Singh, AK, Analytical Chemistry; Jan 15 2005; v.77, no.2, p.585-590

Photopolymerized cross-linked polycrylamide gels for on-chip protein sizing, Herr, AE; Singh, AK, Analytical Chemistry; Aug 15 2004; v.76, no.16, p.4727-4733

Integrated Microfluidic System for Analysis of Oral Biomarkers , Singh, A.K. , (Invited presentation)  Gordon Research Conference on Salivary Glands & Exocrine Secretion, February 6-11, 2005, Ventura, CA

Development of On-Chip Gel Electrophoresis-based Immunoassays for Clinical Diagnostic Applications , Herr, AE; Throckmorton, DJ; Singh, AK., (Oral Presentation) Association for Laboratory Automation:  LabAutomation 2005, January 30 – February 3, 2005, San, Jose, CA.

On-Chip Immunoassay of Tetanus Toxin Antibody Using UV-Initiated Polyacrylamide Gel Electrophoresis , Herr, AE; Throckmorton, DJ; Singh,AK , (Oral Presentation) American Institute of Chemical Engineers (AIChE) Annual Meeting, November 7-12, 2004, Austin, TX.

On-Chip Immunoassay of Tetanus Toxin Antibody Using UV-Initiated Polyacrylamide Gel Electrophoresis, Herr, AE; Throckmorton, DJ; Singh, AK, (Poster Presentation) Micro Total Analysis Systems, (mTAS) 2004, September 2004, Malmo, Sweden, pp 219-221.
 
Rapid On-Chip Separation of Proteins and Immune Complexes Using UV-Initiated Polyacrylamide Gels, Herr, AE; Davenport, AA; Shediac, R; Singh, AK, (Oral presentation) Technical Digest of the 2004 Solid-State Sensor and Actuator Workshop, Hilton Head Isl., SC, June 6-10, Transducers Research Foundation, Cleveland (2004), pp.71-74 .

Microchips Containing Engineered Materials for Biochemical Analysis, Singh, AK, (Oral Presentation) 2004 MRS Spring Meeting, April 12-16, San Francisco CA

Paul Yager (PI) - University of Washington Bioengineering

Wavelength-tunable surface plasmon resonance microscope, E. Fu, J. Foley, and P. Yager, Review of Scientific Instruments 74, 3182-3184, (2003).

T-sensor generated refractive index gradients: calibration of an SPR microscope, J. Foley, E. Fu, and P. Yager, in Micro Total Analysis Systems 2003, M.A. Northrup, K.F. Jensen, and D.J. Harrison, eds., Mesa Monographs, 967-970 (2003).

Optical and electronic design for a high performance surface plasmon resonance imager, T. Chinowsky, T. Mactutis, E. Fu, and P. Yager, Proc. SPIE5261, 173-182, Smart Medical and Biomedical Sensor Technology, B. Cullum, ed.

Characterization of a wavelength-tunable surface plasmon resonance microscope, E. Fu, T. Chinowsky, J. Foley, J. Weinstein, and P. Yager, in press at Review of Scientific Instruments75, 2300-2304, (2004).

Suppression of non-specific adsorption using sheath flow, M. Munson, M. Hasenbank, E. Fu, and P. Yager, Lab on a Chip4, 438-445 (2004).

Parallel microfluidic processing of protein assembly quantified using SPR microscopy, M. Blaylock, E. Fu, and P. Yager, in Micro Total Analysis Systems 2004, T. Laurell, J. Nilsson, K. Jensen, D.J. Harrison, and J.P. Kutter, eds., The Royal Society of Chemistry, 354-356 (2004).

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David Stahl (PI) - UW Civil & Enviromental Engineering

Publications coming soon!

David Walt (PI) - Tufts University

Publications coming soon!

David Wong (PI) - UCLA

"An AC Electroosmotic Bioprocessor for Concentrating Cells and Molecules", Pak Kin Wong, Che-Yang Chan, Tza-Huei Wang and Chih-Ming Ho Analytical Chemistry 76, 6908-6914, 2004.

Salivary transcriptome diagnostics for oral cancer detection", Yang Li, Maie A.R. St John, Xiaofeng Zhou, Yong Kim,  Uttam Sinha, Richard C.K. Jordan, David Eisele, Elliot Abemayor, David Elashoff, No-Hee Park, David T. Wong " Clin. Cancer Res. 10, 8442-50, 2004.

Related Publications

Nonlinear decay of background fluorescence in polymer thin-films - a survey of materials and how they can complicate fluorescence detection in 5TAS, Hawkins, K.R. and Yager, P., Lab on a Chip, 3(4), 255-259 (2003).

Transverse diffusion in microfluidic systems, Yager, P., in Lab-on-a-chip:
Chemistry in Miniaturized Synthesis and Analysis Systems, R.E.
Oosterbroek, R.E., and van den Berg, A., Eds., (2003).

Analysis of molecular binding to human serum albumin using a T-sensor, A. Hatch, E. Garcia, and P. Yager, in Micro Total Analysis Systems 2003, Northrup, M.A., Jensen, K.F., and Harrison, D.J, eds., Mesa Monographs, 1215-1218 (2003).

Capture-and-release concentration of bacteria using free-flow zone electrophoresis, K.J Halle, J.J. Li, M.S. Munson, J. Monteith, E. Guzman, S. Feather, J. Verba, Q. Porter, V. Kenning, A.E. Kamholz, B.H. Weigl, P. Saltsman, R. Bardell, and P. Yager, in Micro Total Analysis Systems 2003, Northrup, M.A., Jensen, K.F., and Harrison, D.J, eds., Mesa Monographs,559-562 (2003).

Modeling controlled release from cavities in microchannels, E. Garcia, F. Kusmanto, B. Finlayson, and P. Yager, in Micro Total Analysis Systems 2003, Northrup, M.A., Jensen, K.F., and Harrison, D.J, eds., Mesa Monographs, 551-554 (2003).

A novel microfluidic mixer based on successive lamination, M.S. Munson and P. Yager, in Micro Total Analysis Systems 2003, Northrup, M.A., Jensen, K.F., and Harrison, D.J, eds., Mesa Monographs, 495-498.

On the importance of quality control in microfluidic device manufacturing, M.R. Steedman, K.M. Lloyd, M.S. Munson, and P. Yager, in Micro Total Analysis Systems 2003, Northrup, M.A., Jensen, K.F., and Harrison, D.J, eds., Mesa Monographs, 1069-1072 (2003).

Simple quantitative optical method for monitoring the extent of mixing applied to a novel microfluidic mixer, Munson, M.S. and Yager, P., Analytica Chimica Acta, 501(1), 63-71 (2004).

Controlled microfluidic reconstitution of functional protein from an anhydrous storage depot, Garcia, E., Kirkham, J. R., Hatch, A.V, Hawkins, K.R. and Yager, P., Lab on a Chip, 4, 78-82 (2004).

Transverse transport in microsystems: theory and applications, Yager, P., Cabrera, C. and Kamholz, A.E., in Separation Methods in Microanalytical Systems, Jvrg P. Kutter and Yolanda Fintschenko, Eds., in press.

The aggregation of multivalent immune complexes expands the useful analyte size range of the diffusion immunoassay, Hawkins, K.R. and Yager, P., Micro Total Analysis Systems 2004, Vol. 1., Laurell, Nilson, Jensen, Harrison and Kutter, Eds., RSC Press, 129-131 (2004)

Transverse transport in microsystems: theory and applications, Yager, P., Cabrera, C. and Kamholz, A.E., in Separation Methods in Microanalytical Systems, Jvrg P. Kutter and Yolanda Fintschenko, Eds., in press.

Sheath flow T-sensor, Munson, M. S., Hawkins, K. R., Hasenbank, M. S., and Yager, P., Lab on a Chip, submitted.

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